Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906075.1_cds_XP_016456312.1_50158
CDS Infomation

[gene=LOC107780299] [db_xref=GeneID:107780299] [protein=4-coumarate--CoA ligase-like 5] [protein_id=XP_016456312.1] [location=join(96106..97119,97412..97798,98144..98211,98296..98521)] [gbkey=CDS]
Sequence

ATGTCAGGTGAAGAGGGATGGACTTCCACGGGCGAAGAAGAGCAATCCACATATCAGAAA
AATGGCTATGATTCCAAGACTGGAATCTATCACTCAGTCCTCCAACTTAGTGAACAACAC
AAAATGCCTAGTGATAACCTTGATCTTGACACAGCCAAATTTGTGTTGTCACAATTTCCA
TCCCCAGCTCAAGCTGAGTCAAAAATTGCACTAATTGACTCTGCAAATAACCAAAAATTA
ACCTATGCTCAACTCCATCGCTCTATTGCTTCACTTGCCACAGGATTGTACCATGTAGGT
GTTAGAAAAGGTGATGTTGTGTTTGTTTTATCACCAAATTCACTTTTGTATCCAACCATA
TGTCTAGCTATTCTTTCAGTTGGTGCTATATTATCCCTAGCCAATCCTCTAAACACTGAA
TCAGAAATCGGAAAACAAGTACGTTTATCGCGTGCAAAATTATCCATTTCTGCACCAGAA
GAAGTCTATAAATTAGTCCCTACTGGTGTGCCTATTCTTCTCATAACACGACCCAAACAC
GACGAAAATTCAGTTTCAGTAGAGGATTTGATTAAGAATTGTGACCCTTTAGAACTGCCA
AAGGACAGACCAACGCTTTCGGATACAGCAGCAATACTATACTCTTCAGGAACTACTGGA
GTTAGCAAAGGTGTAGTGTTAACGCATGCAAATTTCGTAGCAATTATGAAACTTCTCAAG
TTCTACGTCGATGTAACATCGTCTCAGGACGATATTTTCCTCTGTTTCATACCGATGTTT
CATGTATACGGTCTAGTCTTTTTCGGTCTAGGATTATTTTGTTCAGGTGTTACAACTGTG
TTGATGCAAAAATTTGATTTCCAAGCTATGTTGGAAGCAATTCAGGCACACAAAGTCAGT
CACATTCCAGCAGTTCCACCAGTGATTCTTGGACTAGTTAAGTATAACAAAGGTGGTTAT
GACTTATCATCGTTGCGGAAGGTTTCCTCAGGGGCTGCGCCACTGAGCAAAGAGATAGCT
GATGCGTTCCGGGAGAAGTTACCTTGGGTGGAGATCAAGCAAGGCTACGGTCTAACTGAG
ACAACTGGTGCGGCTACATTTTTTGTTACCAATGAAGAGGCAAAGGCGCATCCATGCTCA
GTGGGGATGTTGTTCCCGAGCTTCTCCGCTAAGGTGGTTAATCACGAGACAGGGGAAGCG
TTGCCCCCATTTAAAGAAGGTGAATTGTGGCTAAAAGGTCCAGGGGTGATGAAAGAGTAT
TTTGGAAATGAGGAAGCAACTGCTGCTACAATCACTGCTGATGGCTGGTTCCGAACTGGT
GATCTTTGTTACTTTGACGACGAGGGGTATCTGTACATCGTTGATCGAATAAAGGAACTC
ATCAAGCATAATGGATATCAGGTAGCTCCAGCAGAACTGGAAGCAATATTGTTGAGTCAC
CATCAGATACTTGATGCAGCAGTTGTCCCACTAGAAGATGAGGAAGCAGGACAACTACCA
GTGGCATATGTTGTAAGAACAGCTGGTTCTGGGCTCACAGAAGACCAAGTCATACAATTT
GTTTCTAGCCAAGTAGCCCCATACAAGAAAGTCAGAAGAGTTAATTTTATCAGTGCTATA
CCAAGATCAGCTGCAGGGAAAATATTGCGAAAGGAGTTGGTGCAAAACAAACTGTCAATT
CTGTCCAAATTATAA

Peptide Sequence

PEP ID

XP_016456312.1
PEP Infomation

PREDICTED: 4-coumarate--CoA ligase-like 5 [Nicotiana tabacum]
Sequence

MSGEEGWTSTGEEEQSTYQKNGYDSKTGIYHSVLQLSEQHKMPSDNLDLDTAKFVLSQFP
SPAQAESKIALIDSANNQKLTYAQLHRSIASLATGLYHVGVRKGDVVFVLSPNSLLYPTI
CLAILSVGAILSLANPLNTESEIGKQVRLSRAKLSISAPEEVYKLVPTGVPILLITRPKH
DENSVSVEDLIKNCDPLELPKDRPTLSDTAAILYSSGTTGVSKGVVLTHANFVAIMKLLK
FYVDVTSSQDDIFLCFIPMFHVYGLVFFGLGLFCSGVTTVLMQKFDFQAMLEAIQAHKVS
HIPAVPPVILGLVKYNKGGYDLSSLRKVSSGAAPLSKEIADAFREKLPWVEIKQGYGLTE
TTGAATFFVTNEEAKAHPCSVGMLFPSFSAKVVNHETGEALPPFKEGELWLKGPGVMKEY
FGNEEATAATITADGWFRTGDLCYFDDEGYLYIVDRIKELIKHNGYQVAPAELEAILLSH
HQILDAAVVPLEDEEAGQLPVAYVVRTAGSGLTEDQVIQFVSSQVAPYKKVRRVNFISAI
PRSAAGKILRKELVQNKLSILSKL

Transcript Sequence

Gene sequence data has not been registered.